PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP025560.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 317aa    MW: 34464.7 Da    PI: 5.1034
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP025560.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.56.5e-052903091029
                  HHHHHHHHHHHHHHHCTSCC CS
          HLH  10 rrRRdriNsafeeLrellPk 29 
                  r+RR++iN+++  L+ l+P+
  PCP025560.1 290 RKRREKINERLRVLQGLIPN 309
                  9******************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MEHIEAVSEG EWTSLSGMYI AEEADFMSQL LGIFSNQTSS MGITPDAFWS GGNYEGSHYY  60
SSETSYSNSL EGNFSGGNRT FYPTSRSESY YLSESSHPML VTKNSKISMS IDFGTGDVIK  120
TLNSSLIEGD HDQCLNQERS DGNAEESGGN PAEDVALGNQ RFDMTAAKEQ SMEEINPTKN  180
SLKISQSLEN VQMKKRNIKA KKRGQVTTSN NEEDGNAAGL NRQSYSCCSG DDQSNIVASH  240
SHEKSQELSG GVSITSTSSL SPTEVAALNL SGKSRARRGS ATDSQSLYAR KRREKINERL  300
RVLQGLIPNG TKVGIIP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1290295RKRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33880.12e-28bHLH family protein