PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP025985.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 229aa    MW: 26070.5 Da    PI: 4.8165
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP025985.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM96.73.5e-30351671128
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevls 94 
                  lp G+rF+Pt++e+vv++L +k+ ++ +++   ikevd+y+++P++Lp+   k++a+ +  y+F++r+   a++ +  + a++ gyWk    + evl 
  PCP025985.1  35 LPLGYRFNPTEDEIVVYFLFNKIMDRAMPTYGLIKEVDVYEYDPHQLPNgdfKHNAGCNAAYYFANREPFDASEGKIIKtAANGGYWKVIDDEYEVLF 132
                  699***************************999***************5455666677788*******999976666665999************999 PP

          NAM  95 k.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                  k ++  vg   ++ fy+g+ap+g+kt  vm+eyrl
  PCP025985.1 133 KdSEVIVGFEAVMNFYEGKAPNGTKTPFVMNEYRL 167
                  8455669**************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MASSASSQSA DKYEGFDLLK CSTVQEGKKE ADVRLPLGYR FNPTEDEIVV YFLFNKIMDR  60
AMPTYGLIKE VDVYEYDPHQ LPNGDFKHNA GCNAAYYFAN REPFDASEGK IIKTAANGGY  120
WKVIDDEYEV LFKDSEVIVG FEAVMNFYEG KAPNGTKTPF VMNEYRLNPR VVPAHVLNDS  180
IRNKIERYVV CRIINEEVSN QPVIDYRKES LELLLKYASA GTVKDVEPK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.19e-28NAC family protein