PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP026116.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

bHLH

Protein Properties

Length: 235aa MW: 27516.5 Da PI: 9.2794

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP026116.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	21.3	4.8e-07	83	127	5	54
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h ++Er RR++ ++++ L ++lP ++++K i+++A+ I++L PCP026116.1 83 HMINERMRREKQKHSYLALHSMLPAG-----TRNDKNWIVQMATTNIQQL 127 7899******************97.....79*************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 235 aa Download sequence
MDRYILKALE GEFLWYDESP PVVQNQSAFV PYTNRHISNQ LPNGVTKSMN MNMRMLQFLR 60 KSWQPATARN EAGDDGKERG FRHMINERMR REKQKHSYLA LHSMLPAGTR NDKNWIVQMA 120 TTNIQQLKRY EEELRKKNME LETLLVENEK EGVKWTKIKL RVANPTSGID SMLEVLKCLR 180 HLGLKARNIS SNFSLEEFSA ELEIESKIGA AEIEEFVQET LYEAERKLHF PFPGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43650.1	1e-42	bHLH family protein