PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP026278.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 148aa    MW: 15931.9 Da    PI: 10.513
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP026278.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP246.31.1e-141255955
          AP2  9 dkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 ++ +g+++AeIrdp +ng  +r++lg++ t eeAa a+++a+ +++g
  PCP026278.1 12 RP-WGKFAAEIRDPAKNG--ARVWLGTYETSEEAALAYDRAAFRIRG 55
                 56.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 148 aa     Download sequence    
MSSMGGTKLA KRPWGKFAAE IRDPAKNGAR VWLGTYETSE EAALAYDRAA FRIRGSKALL  60
NFPHRIGLNE PPPVRVTGKR KEPEQEAAAS SSTSSSSSAT PTAATKRSKL DKSVSSSADH  120
GDQANVCHTR QKNNTSYMLP LGEQLLVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47220.11e-36ERF family protein