PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP026395.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 230aa    MW: 25240.2 Da    PI: 8.1994
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP026395.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2643.2e-203079255
          AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 +y+GVr+++ +gr++AeIrd ++    ++r++lg+f++ae+Aa+a++aa++ l+g
  PCP026395.1 30 RYRGVRRRP-WGRFAAEIRDpWK----KTRVWLGTFDSAEDAARAYDAAARILRG 79
                 69*******.**********883....5***********************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MRRGRGAATR AAAPPAEPTG YRPSIGKEVR YRGVRRRPWG RFAAEIRDPW KKTRVWLGTF  60
DSAEDAARAY DAAARILRGP KAKTNFPISC AYPPFYNNPN DPAIEAKLYG SGYGFQDNPV  120
VHPQRPASSS LSSTVESFSG PRPPPQFTTM AAELSRPKRQ PRTPPMVPED CHSDCDSSSS  180
VVEDDEDFVA SSSFRKAPLP FDLNFPPLDV DGDLGGEVDG HDLRCTALCL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20310.13e-20ERF family protein