PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP026454.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 263aa    MW: 29472.8 Da    PI: 4.9539
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP026454.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.36.6e-09155202455
                  HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +h+ +Er RR +iN+++  L++++P +    sk +  a +L + ++Y++sLq
  PCP026454.1 155 SHSLAERVRRGKINERLTCLQDIVPGC----SKTMGMAVMLDEIINYVQSLQ 202
                  8*************************9....788*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MSEFTEDFLS NKPSLPFLDI DQNMEPTNQY ADEFNIPSVV EYPSLNFHTY MPFSNDTYLF  60
SNQEPEFPAG NMIENFPKLQ VHSIVTDGNE SKKRIAVDDA TESSSGISTT PVSETGVKRK  120
NSAERGKRVK SNEKEDEKPK EFVHVRARRG QATHSHSLAE RVRRGKINER LTCLQDIVPG  180
CSKTMGMAVM LDEIINYVQS LQNQIEFLSM KLATASSFYD SNSETDVTET MQIAGELERL  240
KREAAGYGGF GASFHSTSSA WSP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73830.11e-58bHLH family protein