PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP026605.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

bHLH

Protein Properties

Length: 428aa MW: 47245.1 Da PI: 6.018

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP026605.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	32.5	1.6e-10	239	286	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +Le+ ++Y++sLq PCP026605.1 239 SHSLAERVRREKISERMKYLQDLVPGC----NKITGKAGMLEEIINYVQSLQ 286 8************************....999***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 428 aa Download sequence
MNRALPEMLN CMNAPGTIIA GNCTDMTVME RQRDRMKWQK CDHHDQQQQQ IQYNFGGSEL 60 GGVFSLPIHA QGFHGFLGGN PAVKPDPSSE NRWAELGFGS CGLVLNNNGT AGLEEMGNVL 120 NNNISKTFSC SPAVAAEKRS SDTVLSQKLS LPAGKESFKK RKADEVQSNK AATAESDSTE 180 KRMKSCAEEG DSKITEQIST KNNNKESSAD TSKDNSKASE VQKPDYIHVR ARRGQATDSH 240 SLAERVRREK ISERMKYLQD LVPGCNKITG KAGMLEEIIN YVQSLQRQVE FLSMKLAAVN 300 PRLDFNIDDL FAKEMFPTCG ANFQTIGMSS EMTNSAYLQL NPMQRLASCG LDMGLNSTDL 360 ALRRTISAPG SIPEPFLDTS CFTQDQPTAI WDADLQNIFN VEFQQGRSSF QSQPFTGSIE 420 GSNLKMEM

Sequence ? help Back to Top

Protein Sequence Length: 428 aa Download sequence

MNRALPEMLN CMNAPGTIIA GNCTDMTVME RQRDRMKWQK CDHHDQQQQQ IQYNFGGSEL  60
GGVFSLPIHA QGFHGFLGGN PAVKPDPSSE NRWAELGFGS CGLVLNNNGT AGLEEMGNVL  120
NNNISKTFSC SPAVAAEKRS SDTVLSQKLS LPAGKESFKK RKADEVQSNK AATAESDSTE  180
KRMKSCAEEG DSKITEQIST KNNNKESSAD TSKDNSKASE VQKPDYIHVR ARRGQATDSH  240
SLAERVRREK ISERMKYLQD LVPGCNKITG KAGMLEEIIN YVQSLQRQVE FLSMKLAAVN  300
PRLDFNIDDL FAKEMFPTCG ANFQTIGMSS EMTNSAYLQL NPMQRLASCG LDMGLNSTDL  360
ALRRTISAPG SIPEPFLDTS CFTQDQPTAI WDADLQNIFN VEFQQGRSSF QSQPFTGSIE  420
GSNLKMEM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34530.1	2e-68	bHLH family protein