PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP026672.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

G2-like

Protein Properties

Length: 474aa MW: 51764.7 Da PI: 6.4622

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP026672.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103.2	1.6e-32	255	309	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +pr+rWtpeLHerF+eav++L G++kAtPk +l++m+v+gLt++hvkSHLQkYRl PCP026672.1 255 RPRMRWTPELHERFIEAVNRLDGADKATPKGVLKAMNVEGLTIYHVKSHLQKYRL 309 59****************************************************8 PP
2	Myb_DNA-binding	52.3	1.3e-16	257	308	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e++++av++l g t+k + + m+ +g+t +++ks++qky+ PCP026672.1 257 RMRWTPELHERFIEAVNRLDGAdkaTPKGVLKAMNvEGLTIYHVKSHLQKYR 308 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 474 aa Download sequence
MKVGLPSAIM SHHGVISVPQ SETTKGVTSS YCTSPSPIHD FLGSESEGRS FTASKCSSPR 60 VSPFKRAESL GSPTNMRGSP DQHSKSPFSR SSVFCTSLYQ SSSSTSETSR QLGKFPFLPH 120 PPAYGQFNSA VDSKSPLLFS EDMSNQYDDE QSDNLMKDFL NLHGDASHGS FHDISCGSDT 180 LALTEQLELQ FLSDQLDIAI TDNGENPGLD EIYEIPQASP NTAIGLTCSK GSCVTAPLVN 240 ALSSHPSPGP ASAHRPRMRW TPELHERFIE AVNRLDGADK ATPKGVLKAM NVEGLTIYHV 300 KSHLQKYRLA RYMPEKKEDK KASNSEEKKA TSTINESDGR RKGSIHITEA LRLQMEVQKQ 360 LHEQLEVQRA LQLRIEDHAK YLQKILENQQ KAGSALLSPQ VLSSLTTNSI QVSEQQPSSS 420 SCVSLPQLAE SDSSSPLSLK HKATDCSDSE LSAGTKRPRL EEKPDEGAVE NPQL

Sequence ? help Back to Top

Protein Sequence Length: 474 aa Download sequence

MKVGLPSAIM SHHGVISVPQ SETTKGVTSS YCTSPSPIHD FLGSESEGRS FTASKCSSPR  60
VSPFKRAESL GSPTNMRGSP DQHSKSPFSR SSVFCTSLYQ SSSSTSETSR QLGKFPFLPH  120
PPAYGQFNSA VDSKSPLLFS EDMSNQYDDE QSDNLMKDFL NLHGDASHGS FHDISCGSDT  180
LALTEQLELQ FLSDQLDIAI TDNGENPGLD EIYEIPQASP NTAIGLTCSK GSCVTAPLVN  240
ALSSHPSPGP ASAHRPRMRW TPELHERFIE AVNRLDGADK ATPKGVLKAM NVEGLTIYHV  300
KSHLQKYRLA RYMPEKKEDK KASNSEEKKA TSTINESDGR RKGSIHITEA LRLQMEVQKQ  360
LHEQLEVQRA LQLRIEDHAK YLQKILENQQ KAGSALLSPQ VLSSLTTNSI QVSEQQPSSS  420
SCVSLPQLAE SDSSSPLSLK HKATDCSDSE LSAGTKRPRL EEKPDEGAVE NPQL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13040.1	1e-119	G2-like family protein