PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP026866.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

WOX

Protein Properties

Length: 237aa MW: 26613.2 Da PI: 9.6549

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP026866.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	68.1	1.1e-21	91	150	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eq+ +Le l+++ r+p+a+++e++++kl +++ ++V++WFqN++a+e++ PCP026866.1 91 TRWNPTQEQIGILEMLYREgMRTPNAQQIEQITAKLgkygKIEGKNVFYWFQNHKARERQ 150 7***************99************************************97 PP
2	Wus_type_Homeobox	119.1	2e-38	91	152	4	65
Wus_type_Homeobox 4 tRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 tRW+Pt+eQi iLe+ly++G+rtPn+++i++ita+L +yGkie+kNVfyWFQN+kaRerqkq PCP026866.1 91 TRWNPTQEQIGILEMLYREGMRTPNAQQIEQITAKLGKYGKIEGKNVFYWFQNHKARERQKQ 152 8***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
MSSMKVHQFA RGLWEHEPSL TLGCTKRLRP LAPKLANTAA ATSDTTTTLA PFDLKSFIRP 60 ESGPRKLGSS DHLQEKKDSP HPQVETHPGG TRWNPTQEQI GILEMLYREG MRTPNAQQIE 120 QITAKLGKYG KIEGKNVFYW FQNHKARERQ KQKRSSLGLS HSPRTPTPVI STLGEIVVER 180 EEDSPYKRKC RSWGFDCLLE GDHSSVVCKV DNDDAVKGGS VGVMTLELFP LHPEGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G46480.1	8e-72	WOX family protein