PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP027084.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 250aa    MW: 27970.2 Da    PI: 5.9843
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP027084.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2612.6e-19129179255
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  +++GVr+++ +g+++AeIrdp++ng  +r +lg++ t e+Aa a+++a+ k++g
  PCP027084.1 129 HFRGVRRRP-WGKYAAEIRDPKKNG--ARMWLGTYETTEGAALAYDQAAFKMRG 179
                  69*******.***********9998..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MYQDICLEFD FALLESIRQH LLDDNFDTTF QESSPIASGS PSPMYCRSLS FSTLSSTESW  60
RDMLFKVELE DTNEVVGALS DGTDGWSPSS DHHYVDVIDT TPVKPEPQEV VREEIVVARE  120
THMPPSRQHF RGVRRRPWGK YAAEIRDPKK NGARMWLGTY ETTEGAALAY DQAAFKMRGS  180
KAKLNFPHLI GSEGCEPVRI IAKRRAPEFS TSSSSSESGS PKPKRRNTGL RSVAEAESGS  240
TSRVEMVEKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.14e-45ERF family protein