PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP027464.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 353aa    MW: 39797.1 Da    PI: 4.563
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP027464.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.52.2e-20115165155
          AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                  ++y+GVr+++ +g+W+AeIrdp     r +r +lg+f+taeeAa  +++a+ kl+g
  PCP027464.1 115 KKYRGVRQRP-WGKWAAEIRDPA----RrQRLWLGTFDTAEEAAMVYDNAAIKLRG 165
                  59********.**********82....35*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    
MESSILCPIK YSEHRSTTKK LMKPRKKAAS ESASTVTRRI VRISVTDPDA TDSSSDEEEE  60
FFGRQRVKHY INEINIETDF RNSLVINNAR KRPAAEIPVN RRPMKNAVSP TNGGKKYRGV  120
RQRPWGKWAA EIRDPARRQR LWLGTFDTAE EAAMVYDNAA IKLRGPDALT NFVAPPQKEE  180
EKPEPPVTEP IEVETNETTS ASGYDSGSES HNLASPTSVL HFRNQPIIEE ADKPQKFQVS  240
NRVDEDEDET KTGTNILSDD LSYFGNYLPL DLPYFDDAFS FPAPESPLFD SPLFFDDGPA  300
AAASLPDCFM KDDFSELFRD TYDTSLSHTT SPMYQGDDYF QDILFGSDPL VVL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.14e-51ERF family protein