PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP027718.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

ARR-B

Protein Properties

Length: 1822aa MW: 203753 Da PI: 7.3357

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP027718.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	86.9	2e-27	233	286	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av+qL G +kA+Pk+ilelm+v+gLt+e+v+SHLQk+Rl PCP027718.1 233 KPRVVWSVELHQQFVTAVNQL-GLDKAVPKRILELMNVPGLTRENVASHLQKFRL 286 79*****************.******************************8 PP
2	Myb_DNA-binding	38.2	3.4e-12	235	285	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v av+qlG + +k+I + m+ g+t++++ s++qk++ PCP027718.1 235 RVVWSVELHQQFVTAVNQLGLDkaVPKRILELMNvPGLTRENVASHLQKFR 285 678**********************************************97 PP
3	Response_reg	71	5.1e-24	49	157	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl+vdD+ + +++l+ +l + y +v+++++++ al+ll+e++ +D++l D+ mp+mdG++ll++ e +lp+i+++a g + + + ++ Ga PCP027718.1 49 VLVVDDDTTCLRILELMLLRCLY-QVTTCSEATVALNLLRERKdcFDVVLSDVHMPDMDGFKLLEHVGLEM-DLPVIMMSADGRTSVVMRGIRHGAC 143 89*******************.***********99999*******************6644.8******************** PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 dfl Kp++++el + PCP027718.1 144 DFLIKPISEAELKN 157 *********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1822 aa Download sequence
MAALQRVAQS SVSTTASSYG SCKAGDGVLS PSAGIEMAVP DQFPVGLRVL VVDDDTTCLR 60 ILELMLLRCL YQVTTCSEAT VALNLLRERK DCFDVVLSDV HMPDMDGFKL LEHVGLEMDL 120 PVIMMSADGR TSVVMRGIRH GACDFLIKPI SEAELKNIWQ HVIRKKWNGS KELEHSGSLE 180 DNDYHKRGNN DFEYTSSVNE GTEVSLKGHK KRINAKEDDD GDTENDDLST SKKPRVVWSV 240 ELHQQFVTAV NQLGLDKAVP KRILELMNVP GLTRENVASH LQKFRLYLKR LSGVAQQQSG 300 IANPFCGPMD SNGKLGSLSR FDFQALAASG QIPPQTLAAL QAELLGQPAG NLVPAMDQPA 360 LLQASLQAPK RPPVEHGVPF MQPFAKSQSN VSKHFPQSVI SAEDASVGFG QWRSNSCSAV 420 APSNDHGGLS TQNSNLLMGI VQQEQRQHKR TQQQPVLTEP SRTFNVQPSC LVVPSQSSTG 480 FQAGNSPASV NQSSSFNRST VIDYSLLSDQ SNNSLNVGHI PTGNLKTSGT LGGYSGPGSI 540 CATSCLVNAV NSTSYQNSTA TLSDSRELPG SLHNTANSQG FYVDKSGEML DQGPLRNLGF 600 VGKETCIPSR FAVDDFESQM SNLNPGRIHV ESSGTLVKQE PSEDYVYNAK LDPVYVPAPD 660 SDAETPLASE TRKIEDKCGG QLSLHSSPAL AGCATHPASQ KFGDPTLMRF LIARSMDSDK 720 AAKMFVQWHK WRDSFVPNGF VSDAEVKDEL DDRKIFLQGL SKDGYPVMVI KASKHFPSKD 780 QLQFKKFVVH LLDKTIASSF RGKEIGNEKM IGILDLQQIS YKNIDARGLI TGFQFLQSYY 840 PERLAKCFIL NMPWFFVSVW RMVSRFLEKA TQEKLLGTPR IFKQTSDNDW VREVDFTPSC 900 CIGQSSAVCL ELPYGSVLPN LREKFLHYQE TEGRFVLEIG NPFSCNSDLV PVVGPPEGIN 960 LPYKILFKIN SLVQHGCVPG QALDVTFYKL VDPSKRRIDY IECALDKLFR LKACCYDPVS 1020 WLCEQYRDYK SCTRIPETPA ISLDDGMVYV HRVQVTPSKV YFSGPEVNLS NRVLRKYPQD 1080 IDNFLRVSFV DEDLGKIRLK DLCLRPRKSN TSAEEERRTR VYERIFSILR NGIVIGDKKF 1140 EFLAFSSSQL REHSVWMFAS RSELSAQGIR NWMGDFRDIR NVAKYGARLG QAFSSSRETF 1200 NVDRDEIELS PDVKIERSGV KYCFSDGIGK ISAEFAERVA RKCGRSSTPS AFQIRIGGYK 1260 GVVAVDPTLT KNLALRESMC KYQSNNTALD VLKWSKYQPC FLNRQLITLL STNGVPDHVF 1320 QRKQRQALNQ LEGVLTDPSR AKEALETIFQ GEVTDVLKEM LSCGYKPDAE PFLSLTLQAF 1380 CASKLMELRK KTRIFVSSGR SMMGCLDETG TLEYGHVFVQ YSRRVISTGS AHSNTTSSEE 1440 KFVVDRNVVV ARNPCLHPGD VRVLTAVDVP ALHHMVDCVV FPQKGERPHP DECSGGDLDG 1500 DFYFVSWDSD LIPPRKARPM NYTPAPSIEL DHDVTMEEVA ESFTNYIVND MLGIISNAHA 1560 VFADTQPQKA MSAQCIELAK LCSYAVDSPK TGVVVEVPRS LRAKEYPDFM EMVEKPTYES 1620 RRVIGKLFRQ VKNVELGSHS SSIKSFTVEV ARKFYDPDME VDGFKAYIDD AINYKREYDY 1680 KLGNLMDYYG IKTEADILTG NITSVSKFFD KRKDLETINY TVRSLKKEAR TWFYANQSDS 1740 STNVDDVSST KASAWYYVTY HPRYWGCCNK GMERDHFLSF PWCVFDKLIQ IKREKTSTRN 1800 SFHMSDQRGV MLDKCRSTCS PL

Sequence ? help Back to Top

Protein Sequence Length: 1822 aa Download sequence

MAALQRVAQS SVSTTASSYG SCKAGDGVLS PSAGIEMAVP DQFPVGLRVL VVDDDTTCLR  60
ILELMLLRCL YQVTTCSEAT VALNLLRERK DCFDVVLSDV HMPDMDGFKL LEHVGLEMDL  120
PVIMMSADGR TSVVMRGIRH GACDFLIKPI SEAELKNIWQ HVIRKKWNGS KELEHSGSLE  180
DNDYHKRGNN DFEYTSSVNE GTEVSLKGHK KRINAKEDDD GDTENDDLST SKKPRVVWSV  240
ELHQQFVTAV NQLGLDKAVP KRILELMNVP GLTRENVASH LQKFRLYLKR LSGVAQQQSG  300
IANPFCGPMD SNGKLGSLSR FDFQALAASG QIPPQTLAAL QAELLGQPAG NLVPAMDQPA  360
LLQASLQAPK RPPVEHGVPF MQPFAKSQSN VSKHFPQSVI SAEDASVGFG QWRSNSCSAV  420
APSNDHGGLS TQNSNLLMGI VQQEQRQHKR TQQQPVLTEP SRTFNVQPSC LVVPSQSSTG  480
FQAGNSPASV NQSSSFNRST VIDYSLLSDQ SNNSLNVGHI PTGNLKTSGT LGGYSGPGSI  540
CATSCLVNAV NSTSYQNSTA TLSDSRELPG SLHNTANSQG FYVDKSGEML DQGPLRNLGF  600
VGKETCIPSR FAVDDFESQM SNLNPGRIHV ESSGTLVKQE PSEDYVYNAK LDPVYVPAPD  660
SDAETPLASE TRKIEDKCGG QLSLHSSPAL AGCATHPASQ KFGDPTLMRF LIARSMDSDK  720
AAKMFVQWHK WRDSFVPNGF VSDAEVKDEL DDRKIFLQGL SKDGYPVMVI KASKHFPSKD  780
QLQFKKFVVH LLDKTIASSF RGKEIGNEKM IGILDLQQIS YKNIDARGLI TGFQFLQSYY  840
PERLAKCFIL NMPWFFVSVW RMVSRFLEKA TQEKLLGTPR IFKQTSDNDW VREVDFTPSC  900
CIGQSSAVCL ELPYGSVLPN LREKFLHYQE TEGRFVLEIG NPFSCNSDLV PVVGPPEGIN  960
LPYKILFKIN SLVQHGCVPG QALDVTFYKL VDPSKRRIDY IECALDKLFR LKACCYDPVS  1020
WLCEQYRDYK SCTRIPETPA ISLDDGMVYV HRVQVTPSKV YFSGPEVNLS NRVLRKYPQD  1080
IDNFLRVSFV DEDLGKIRLK DLCLRPRKSN TSAEEERRTR VYERIFSILR NGIVIGDKKF  1140
EFLAFSSSQL REHSVWMFAS RSELSAQGIR NWMGDFRDIR NVAKYGARLG QAFSSSRETF  1200
NVDRDEIELS PDVKIERSGV KYCFSDGIGK ISAEFAERVA RKCGRSSTPS AFQIRIGGYK  1260
GVVAVDPTLT KNLALRESMC KYQSNNTALD VLKWSKYQPC FLNRQLITLL STNGVPDHVF  1320
QRKQRQALNQ LEGVLTDPSR AKEALETIFQ GEVTDVLKEM LSCGYKPDAE PFLSLTLQAF  1380
CASKLMELRK KTRIFVSSGR SMMGCLDETG TLEYGHVFVQ YSRRVISTGS AHSNTTSSEE  1440
KFVVDRNVVV ARNPCLHPGD VRVLTAVDVP ALHHMVDCVV FPQKGERPHP DECSGGDLDG  1500
DFYFVSWDSD LIPPRKARPM NYTPAPSIEL DHDVTMEEVA ESFTNYIVND MLGIISNAHA  1560
VFADTQPQKA MSAQCIELAK LCSYAVDSPK TGVVVEVPRS LRAKEYPDFM EMVEKPTYES  1620
RRVIGKLFRQ VKNVELGSHS SSIKSFTVEV ARKFYDPDME VDGFKAYIDD AINYKREYDY  1680
KLGNLMDYYG IKTEADILTG NITSVSKFFD KRKDLETINY TVRSLKKEAR TWFYANQSDS  1740
STNVDDVSST KASAWYYVTY HPRYWGCCNK GMERDHFLSF PWCVFDKLIQ IKREKTSTRN  1800
SFHMSDQRGV MLDKCRSTCS PL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	1e-102	ARR-B family protein