PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP027861.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 242aa    MW: 26108.4 Da    PI: 5.4301
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP027861.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP223.81.1e-07333942
          AP2  9 dkkrgrWvAeIrdpsengkrkrfslgkfgtaeeA 42
                 ++++g+WvA Ir+ +   kr+r +l +f ta++A
  PCP027861.1  3 KRSWGKWVAKIRESR---KRTRKWLRTFATAKDA 33
                 567**********42...46**********9888 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MRKRSWGKWV AKIRESRKRT RKWLRTFATA KDATCTYNQA TIILYGSRAQ LNLQPSGSSS  60
QNSTRGSSSF SSSSTSLSLP LSGFESTCRK LLSSGFEASF VIPWSGFESS SVVPWSWSGF  120
ESSSVVPWSG FEFISPLSTP MASLAQASTA LSTSFKPTLA KPETITEVCG IVKKQLALAE  180
DIDVSAGSKF SELGVDSLDT VEIVMGLEEV FGITVEEENA QTIATVQDAA DLIEDLVAKK  240
SA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40220.11e-15ERF family protein