PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP027902.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family C2H2
Protein Properties Length: 143aa    MW: 16060.1 Da    PI: 7.6714
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP027902.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H218.84.4e-062446123
                 EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                 ++C++Cg+ F ++  L  H++ H
  PCP027902.1 24 FECHYCGRKFESSQALGGHQNAH 46
                 89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    
MKLFGFAVTD DSDLVAMIIE SKKFECHYCG RKFESSQALG GHQNAHKRER ELERMAMLEN  60
VQHLRHPPPN RDHRDQNQLV AASVPIFVCS SGSTSNINGD HAGAARVPSV VAPRNPHGPY  120
FKQIEQVLPN TDEGNYVDLR LRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58070.14e-10C2H2 family protein