PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP027922.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ZF-HD
Protein Properties Length: 202aa    MW: 21969.2 Da    PI: 7.5784
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP027922.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer87.51.4e-271162458
  ZF-HD_dimer  4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58
                  +Y+eCl+NhAaslG++a+DGCgEf+ +   ++++ +l+CaACgCHRnFHRr + 
  PCP027922.1 11 DVYRECLRNHAASLGSYATDGCGEFTLD---HASPGGLQCAACGCHRNFHRRVTY 62
                 58*************************8...5689*****************875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    
MEGDHDPNTN DVYRECLRNH AASLGSYATD GCGEFTLDHA SPGGLQCAAC GCHRNFHRRV  60
TYAATSSQAV GGGGSGHLQH HVIMSCSSRG RDPAENIITT HDQLIDYNAG GGGSPDSGER  120
MSSEKKRFRT KFTAEQKEKM LAFAEKLGWK LLRKDLEDEI ETFCRSVGVS RQVFKVWMHN  180
HKNLSSSSTS ASTGNASSLT SQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.16e-41ZF-HD family protein