PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP027941.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 182aa    MW: 21631.4 Da    PI: 6.5207
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP027941.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM66.67.3e-21101432128
          NAM   2 ppGfrFhPtdeelvveyLkkkvegkk...leleevikevdiykv.ePwdLpkkvkaeek...ewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                  p  f F+Ptd+e++  +L +   +++    + +e ++e d++++ ePw++ +++ ++++   ++yfF++ ++  +tg r +r + +g+W+++  +k v
  PCP027941.1  10 PYAFCFQPTDQEIIRSFLYRMGVKRElllQPYNEYVHEEDLFDFkEPWEIWEEYGGDDHfnqDLYFFCELERLPPTGLRIRRNIGEGIWNQKQPTKLV 107
                  67899***************988888786666678*******9889****86655554454478********************************** PP

          NAM  93 lskkgel..vglkktLvfykgrapkgektdWvmheyrl 128
                  ++++++   +g kk + +y++r ++ ++  W+++ey+l
  PCP027941.1 108 YNENRHPnpMGRKK-MFLYENRGSE-QHGGWILDEYSL 143
                  *9854443266555.5566666666.799*******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    
MAGPLVPLVP YAFCFQPTDQ EIIRSFLYRM GVKRELLLQP YNEYVHEEDL FDFKEPWEIW  60
EEYGGDDHFN QDLYFFCELE RLPPTGLRIR RNIGEGIWNQ KQPTKLVYNE NRHPNPMGRK  120
KMFLYENRGS EQHGGWILDE YSLLVGADGS DQTASKDRYD FPFVICRLRK NDRSGGKKKR  180
NN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12260.11e-13NAC family protein