PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP027944.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

E2F/DP

Protein Properties

Length: 464aa MW: 51165.4 Da PI: 4.5612

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP027944.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	86.2	2.4e-27	142	207	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r ++sL+llt+kf++l++++e+gi++ln++a++L +v ++RRiYDi+NVLe+++liekk kn+i+wkg PCP027944.1 142 RFDSSLGLLTKKFINLIKHAEDGILDLNKAADTL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIQWKG 207 6789****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 464 aa Download sequence
MSGSRPPNLP VQPLEPIMQQ PPKRQLPFSS MKPPFSAAAD YHGFLPDPRQ STDQETYGIT 60 VKPPLKRKSD AVDCEAESTD RTTAPGYTEV ANIPLQTPVA TKVGKANKAS RLTKCSKSGP 120 QTPASNVGSP SGANVTPAGP CRFDSSLGLL TKKFINLIKH AEDGILDLNK AADTLEVQKR 180 RIYDITNVLE GIGLIEKKLK NRIQWKGLDV SKTGDADENY PSLQAQVESL STEERRLDQQ 240 IREMQERLRD LSDDESNKKW LFVTEEDIKG LPSLQNETLI AIKAPHGTTL EVPDPDEAVD 300 YPQRRYRMLL RSTMGPIDVY LVSQFEEKFE EINGVEVPTN IPSTSWANEN PAATMVAEDR 360 GKDVEMQVPD DHRMSADPTA AQDVTSGIMK IVPSDVDSDA DYWLLSDADI SITDMWRTEP 420 GVVWNDLGAL DQDYPLVNAS SPRPQTPPSS LIEVPSTTSN PTKT

Sequence ? help Back to Top

Protein Sequence Length: 464 aa Download sequence

MSGSRPPNLP VQPLEPIMQQ PPKRQLPFSS MKPPFSAAAD YHGFLPDPRQ STDQETYGIT  60
VKPPLKRKSD AVDCEAESTD RTTAPGYTEV ANIPLQTPVA TKVGKANKAS RLTKCSKSGP  120
QTPASNVGSP SGANVTPAGP CRFDSSLGLL TKKFINLIKH AEDGILDLNK AADTLEVQKR  180
RIYDITNVLE GIGLIEKKLK NRIQWKGLDV SKTGDADENY PSLQAQVESL STEERRLDQQ  240
IREMQERLRD LSDDESNKKW LFVTEEDIKG LPSLQNETLI AIKAPHGTTL EVPDPDEAVD  300
YPQRRYRMLL RSTMGPIDVY LVSQFEEKFE EINGVEVPTN IPSTSWANEN PAATMVAEDR  360
GKDVEMQVPD DHRMSADPTA AQDVTSGIMK IVPSDVDSDA DYWLLSDADI SITDMWRTEP  420
GVVWNDLGAL DQDYPLVNAS SPRPQTPPSS LIEVPSTTSN PTKT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22220.2	1e-153	E2F/DP family protein