PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP027965.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 261aa    MW: 28952.7 Da    PI: 4.9336
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP027965.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2574.7e-1894143255
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                   y+GVr +  +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a++ ++g
  PCP027965.1  94 TYRGVRMRQ-WGKWVSEIREPRK---KSRIWLGTFPTPEMAARAHDVAALTIKG 143
                  69****998.**********843...6**********************99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MEEEQFNFID CEAQTTSSYS NSTTSPSAES PARKISERSS SSSSSNQIQL LDGHEKATTT  60
NDDDDDDQIS QKKAKINNGI NGDGRQQRHP HKPTYRGVRM RQWGKWVSEI REPRKKSRIW  120
LGTFPTPEMA ARAHDVAALT IKGRSAVLNF PELAQELPVP ASALPKDIQV AAAKAAASTY  180
PTRSCRSSSL EAEAEAETEL ISQAVHDSST HDSSSTSPSN SYNDDMFFNL PDLLLDVGHH  240
SDPGFRFSVP WLDEEPEFLW Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16750.16e-43ERF family protein