PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP027967.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

MYB

Protein Properties

Length: 195aa MW: 22261.1 Da PI: 9.5831

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP027967.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	63.3	4.9e-20	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +l+++++ +G ++WktIa+ g++R++k+c++rw++yl PCP027967.1 15 KGAWTAEEDRKLAEYIEIHGAKRWKTIASIAGLNRCGKSCRLRWLNYL 62 79********************************************97 PP
2	Myb_DNA-binding	51.9	1.8e-16	68	113	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ + +E++l+++++k+lG++ W++Ia +++ gRt++++k++w+++l PCP027967.1 68 RGNISDDEEDLIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNSHL 113 7899****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 195 aa Download sequence
MARKNDGSAK RVMNKGAWTA EEDRKLAEYI EIHGAKRWKT IASIAGLNRC GKSCRLRWLN 60 YLRPNIKRGN ISDDEEDLII RLHKLLGNRW SLIAGRLPGR TDNEIKNYWN SHLSKKMSQK 120 EKKLQTSTAQ DTTTKTATAT KPSHKASNDC ADTNFDVNEF FDFSAEGSYG LEWVNKFLEL 180 DEDTTGYQEK VSSIV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G35550.1	4e-54	MYB family protein