PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP028024.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 272aa    MW: 29789.4 Da    PI: 8.1654
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP028024.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2643.2e-2090139255
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                   y+G+r+++ +g+W+AeIrdp++     r++lg++ taeeAa+a+++a+ +++g
  PCP028024.1  90 VYRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTYNTAEEAARAYDEAAVRIRG 139
                  69*******.**********954...4**********************99997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MCGGAIISDF IASKRGRKLT AEDLWSELDT ISDLLGIDHS NSINKQPEDY KVVQKPKASF  60
TKATSDEKPK KATEAAAAAA AEGKRVRKNV YRGIRQRPWG KWAAEIRDPR KGVRVWLGTY  120
NTAEEAARAY DEAAVRIRGD KAKLNFAQPP PSSLPPPLAP ATPPPTKKRC IVAESTRVKS  180
TQPSFQTGSY HYDPFYQGGG DMYAKNEVAG GDGGYELKEQ ISSLESFLGL DEVVAEQPSQ  240
VASGSGESDS LDLWMLDDLL THQQQLRGQS LY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.16e-51ERF family protein