PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP028073.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB_related
Protein Properties Length: 218aa    MW: 24400.2 Da    PI: 4.6792
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP028073.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.92.7e-09169211145
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                      ++ ++++E+ l+ + +++ G + W++Ia +++ gR+++++  +w 
      PCP028073.1 169 KLDFSEDEETLITRMFNLVGER-WSLIAGRIP-GRSAEEIEKYWT 211
                      5789******************.*********.***********5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MWWGLGPGCD NLVLEPIPGQ KCADQDVGAL WGVDCNILRR SDPFADANAE NSGAGTKEYV  60
HVRVQQRNGR KSLTTVQGLK KEYSYNKILK DLKKEFCCNG TVVEDPELGQ VIQLQGDQRK  120
NVSSFLVQLK SAAPTFLIFS TPMADLDHSH SSSDDNSVDS REESSQDSKL DFSEDEETLI  180
TRMFNLVGER WSLIAGRIPG RSAEEIEKYW TSRYSTSE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46410.18e-16MYB_related family protein