PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP028094.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 327aa    MW: 35672.8 Da    PI: 7.3815
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP028094.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.42e-19117167256
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                   y+GVr+++ +g+WvAeIr p +   r r++lg+++tae Aa a+++a+ kl+ge
  PCP028094.1 117 LYRGVRQRH-WGKWVAEIRLPQN---RVRVWLGTYDTAEAAAYAYDRAAYKLRGE 167
                  59******9.**********954...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MDTMQENNLA FGFTDAIDIG SSLSNIILTS STNTLDSIFS HCPQTLTTAV TTTNSGSSVS  60
EPLGSSVYLR QRDLLQKFCD ESRANANATV SRSFETNPLQ SSACSSTTYM APYKKKLYRG  120
VRQRHWGKWV AEIRLPQNRV RVWLGTYDTA EAAAYAYDRA AYKLRGEYAR LNFPNFTDPS  180
KLGFGDGSRL NAVKNSVDAK IQAIIQKVKR DRAKKNVKKS SSSVGGGDRS FSENGKVVKV  240
ESSPLSSSSP LVFGDGFGHE TASLTPTPTV SEDGVWRSEK NSPPSVSTEF QMGMAELGMG  300
EESEFEGCSL AGMPSFDPEL IWEVLAN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64380.12e-48ERF family protein