PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP028191.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

bHLH

Protein Properties

Length: 235aa MW: 27584.7 Da PI: 9.5772

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP028191.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	15.2	3.9e-05	85	127	7	54
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++Er RR++ ++++ L +llPk ++ +K i++++ I+ L PCP028191.1 85 INERMRREKHKQSYLALHSLLPKG-----TRSDKNWIVQMTATNIQRL 127 78********************96.....5777777777777777766 PP

Sequence ? help Back to Top
Protein Sequence Length: 235 aa Download sequence
MDQCILKALE GELLWYDERP PVVLNQSAFV PYTNTPVIDK LPNDVTKSMN TNKRMLQFLR 60 KSWQPATARN EAEQDSRQRG FRRMINERMR REKHKQSYLA LHSLLPKGTR SDKNWIVQMT 120 ATNIQRLERY KEELIKRNVE LEELLVENEK ERVKWSKIRL KVANPTSGID SMLEVLKCLQ 180 YLGLKARNVH SNFSPEEFSA ELEIETKIGA AEIEEAVQET LNEAERKLRF PFPGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43650.1	3e-44	bHLH family protein