PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP028262.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

bHLH

Protein Properties

Length: 240aa MW: 27096.6 Da PI: 8.0084

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP028262.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.3	5.5e-13	70	116	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+E+rRR+riNs +++Lr llP + K +Ka+ L k+v+ +k+L PCP028262.1 70 KNHKEAEKRRRERINSHLDKLRGLLPCN-----SKTDKASLLAKVVQRVKEL 116 58***********************8.....7**********999988 PP

Sequence ? help Back to Top
Protein Sequence Length: 240 aa Download sequence
MQPADHQGQE LYRFLAQNGL INVNNDHQLS AMQSFCSSSS NNYSYYPLEV SGVSTEHDAS 60 PQDRALAALK NHKEAEKRRR ERINSHLDKL RGLLPCNSKT DKASLLAKVV QRVKELKQQT 120 SEIAELETFP SETDEITVLS SNDYTSDGRI VFKASLCCED RSDLLPDLIE ILKSLHLRTI 180 KAEIATLGGR IRNVLIVAAD KDHTIESVHF LQNALKSLLE RSNSSERSKR RRVLDRTLVL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	229	233	KRRRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41130.1	6e-82	bHLH family protein