PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP028264.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family C2H2
Protein Properties Length: 146aa    MW: 16219.2 Da    PI: 9.7374
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP028264.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.31.3e-052446123
                 EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                 ++C++Cg+ F ++  L  H++ H
  PCP028264.1 24 FECQYCGRKFESSQALGGHQNAH 46
                 89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 146 aa     Download sequence    
MKLFGFSVTD DSDRVAMIIE SKKFECQYCG RKFESSQALG GHQNAHKRER QLERMAMLDR  60
VQHHHPPPNH GHRDQYQRVA TSVPIIVGSS GSTSNINGGS DHGHAGAARV PSVVAPRNPH  120
GLNFKHIKQV VPNVDEGNDV DLRLRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24625.17e-14C2H2 family protein