PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP028291.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 450aa    MW: 50249.8 Da    PI: 7.1501
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP028291.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.34.6e-19206256256
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                   y+GVr+++ +g+WvAeIr p++   r+r +lg+f+tae+Aa a+++ + kl+ge
  PCP028291.1 206 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEDAAMAYDREAFKLRGE 256
                  59******9.**********955...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 450 aa     Download sequence    
MSSPKKSGKS KMETSGEWEV NKDKELDFSF ERPPWKPGFS EASTASNRPL KKVKSPERQD  60
PIQASPSLAH HQTPSPIIAP HPSSSSSKIV FPFSFDGSQQ PMMQFPHPFN PTNLPMFPSP  120
IQQQQNQNPQ QMISFESHQQ QQQGMSYPSP FVGESVSWQQ HQKMLQHWSD ALNLSPRGRV  180
MMMNRLGPDG RPMFRPLAMP YNTTKLYRGV RQRHWGKWVA EIRLPRNRTR LWLGTFDTAE  240
DAAMAYDREA FKLRGENARL NFPELFLNKD KSDVSVSSAP SSATISPPRH EGSKPTRHRK  300
QPQKIKGSAS NIEAMPPPPI PHTQEENSTD NDSGLESSEA KAIDEVEANT DGAGGGSSQQ  360
KEIVWGDMAE DWLNAIPAGW GPGSPVWDDL DTNNSLLLQS DLPFTNPNQQ DYNININPQQ  420
AIQNSGSGSG SGSSSSSSYP MKNLFWKDQD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20880.17e-56ERF family protein