PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP028298.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

DBB

Protein Properties

Length: 205aa MW: 22682.8 Da PI: 4.9887

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP028298.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	22.9	1.7e-07	4	44	5	39
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 C+ +e+ +++ C ++ lC++C +e H H++ PCP028298.1 4 QCDACEKAPAKVICCADEAALCAKCDVEVHAAnklaskHQR 44 7*****************************65667777765 PP
2	zf-B_box	32	2.6e-10	55	97	2	38
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 + ++C+ +++k + +fC +++ l+C+dC +++H+ H+ PCP028298.1 55 KLPTCDICQDKAAFIFCVEDRALVCQDCDESIHSAnsrsanHQ 97 789******************************6556666665 PP

Sequence ? help Back to Top
Protein Sequence Length: 205 aa Download sequence
MKIQCDACEK APAKVICCAD EAALCAKCDV EVHAANKLAS KHQRLLLECV SKSNKLPTCD 60 ICQDKAAFIF CVEDRALVCQ DCDESIHSAN SRSANHQRFL ATGIRVALSN GCCRPGLLSE 120 FESSDKQKES FEFGELEWIG DMGVFREEQF PQKAMGAVAE VPKLPVSQST NFTSYSPAKL 180 NNPYKKPRIE MLEDDEDHFT VPDLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31380.1	3e-79	DBB family protein