PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP028384.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 226aa MW: 25486.8 Da PI: 8.7201

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP028384.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	154.4	4.9e-48	14	138	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kg 97 lppGfrF+Ptdeelv +yL+ kv + +l++ ++i+e++++ ++PwdLp + e+e yfFs++++ky++g+r+nr+t+sgyWkatg dk+++s+ ++ PCP028384.1 14 LPPGFRFQPTDEELVFQYLRCKVFSCPLPA-SIIPEINVCMYDPWDLPGN---LEQERYFFSNKESKYRNGNRANRVTSSGYWKATGADKRIVSSrRN 107 79**************************.89***********54...46799******************************998677 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 + vg kktLvfy+g++p+ +ktdWvmhey l PCP028384.1 108 HIVGKKKTLVFYRGKSPHVSKTDWVMHEYCL 138 78*************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 226 aa Download sequence
MDKFKFVGNG MIRLPPGFRF QPTDEELVFQ YLRCKVFSCP LPASIIPEIN VCMYDPWDLP 60 GNLEQERYFF SNKESKYRNG NRANRVTSSG YWKATGADKR IVSSRRNHIV GKKKTLVFYR 120 GKSPHVSKTD WVMHEYCLVN AETTASIHTT ENALAPKGNW VLCRVFSKKR SGKIDEEIVV 180 NYNSIEVNNN ANPASSSSSC SSSTGITEVT SPSEECGEEI SSCPKF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13180.1	2e-82	NAC family protein