PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP028542.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 281aa    MW: 30853.3 Da    PI: 8.3305
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP028542.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.29.5e-11164211455
                  HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  PCP028542.1 164 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 211
                  8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MDPPTLVNEC SFPNANATSF NFSEMWEFPM NGTGASAGDS GGALGLRRPN FSQSFAQFGD  60
VSGAIRDVLA GSDPNPMRGH GGAARKRREA DDESPKSSGN IGASDCDGKR LKRSARCRDE  120
STRELKAEVE TSSGKPAEQN AQPPDPPKQD YIHVRARRGQ ATDSHSLAER ARREKISERM  180
KILQDLVPGC NKVIGKALVL DEIINYIQSL QRQVEFLSMK LEAVNTRMNR GIEGFPAKDF  240
GQQTFDNAAM AFGTQPRREY SRGNSPEWLH MQVGGGFDRT T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.14e-94bHLH family protein