PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP028646.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 245aa    MW: 28241.8 Da    PI: 9.1604
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP028646.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH47.43.4e-1574125155
                  CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  ++ +hn+ Er RR++iN+ ++ Lr+llP +   + kKls   +  +A +YI +Lq
  PCP028646.1  74 KKLNHNASERDRRKKINNLYASLRSLLPAD---QTKKLSIPNTISHALKYIPELQ 125
                  6789**************************...9******************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MLALSPPLFS TIGCSLDQDS ISHENHNYFY SKDITTTNDY QTADSFLHLL PSHHPKVDLD  60
RSTPSTTVTG PMAKKLNHNA SERDRRKKIN NLYASLRSLL PADQTKKLSI PNTISHALKY  120
IPELQKQVEG LNRKREELLS RASKQEDAMH KERKIKSTAR SSQSAVSTYR LNDREVAIQI  180
STFKTHNNLL FEILQHLEEE GLQLENASFF ESYGGRVFYN LHLQVDRTYR LERENLSEKL  240
MSFYA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.12e-45bHLH family protein