PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP028891.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family B3
Protein Properties Length: 242aa    MW: 27384.6 Da    PI: 9.8114
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP028891.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B351.81.4e-166702897
                 --..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
           B3 28 gkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97
                 g +++  + tl+ +sg+sW+v l   + +g+++++kGW++Fv+++ L+ g f+vFk+dg+++f   vk++
  PCP028891.1  6 GRPPC--KCTLRGPSGESWTVGL-EGREDGKFFFRKGWQNFVEDHLLEIGNFLVFKYDGDTKF--DVKIY 70
                 45555..689*************.3445555***************************99888..77776 PP
2B348.61.5e-151352201599
                  -EE--HHH.HTT---..--SEEEEEETTS-EEEEEE.....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
           B3  15 rlvlpkkfaeehggkkeesktltledesgrsWevkliy...rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                  r+++pkk a + g++++e   ++l d++g+ W+vkl++   + +++r+++t+G  +  +an++  gD+ vF+l+++++ e+++++fr+
  PCP028891.1 135 RMTVPKKLAVAKGLIEKE--RVRLIDPDGKAWKVKLRVdeiKSCGSRVLMTEGLMKCWHANNVSPGDTAVFELVNEKRSEMKIHFFRA 220
                  799*********999766..6***************99986666667***************************999999******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MENFNGRPPC KCTLRGPSGE SWTVGLEGRE DGKFFFRKGW QNFVEDHLLE IGNFLVFKYD  60
GDTKFDVKIY NPTGCEKEEA VAAKKTTGNQ ASIRNRRKSM LYKPADVKEA SDGHIAFRSK  120
YKTCFKATVP KIPYRMTVPK KLAVAKGLIE KERVRLIDPD GKAWKVKLRV DEIKSCGSRV  180
LMTEGLMKCW HANNVSPGDT AVFELVNEKR SEMKIHFFRA EAGGKRPTVV LELDASDSLV  240
EN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24700.16e-18B3 family protein