PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP028892.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family B3
Protein Properties Length: 243aa    MW: 27516.4 Da    PI: 10.0055
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP028892.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B353.15.9e-176702897
                 --..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
           B3 28 gkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97
                 g +++  + tl+++sg+sW+v l  ++++g+ ++++kGW++Fv+++ L+ g f+vF++dg+++f   vk++
  PCP028892.1  6 GRPPC--KCTLRSPSGESWTVGL--EGRKGGkFFFRKGWRHFVEDHLLEIGNFLVFEYDGHTKF--DVKIY 70
                 55555..699*************..5554444***************************98888..77776 PP
2B349.67.1e-161292191199
                  HHT.T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE.....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
           B3  11 lks.grlvlpkkfaeehggkkeesktltledesgrsWevkliy...rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                  +k+  r+++pk+ a + g++k+e   ++l d++g+sW+vkl+    + +sg+  +t+G     +an++ +gD+vvF+l+++++ e+++++fr+
  PCP028892.1 129 SKNpYRMTVPKELAVAVGLIKKE--RVRLIDPNGKSWKVKLRLdntKYGSGHLRMTEGLIACWRANNVSTGDTVVFELVNKKRSEMKIHFFRA 219
                  555579************99776..6***************9976444555599*************************999999*****997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MENFNGRPPC KCTLRSPSGE SWTVGLEGRK GGKFFFRKGW RHFVEDHLLE IGNFLVFEYD  60
GHTKFDVKIY NPTGCEKEEA AAAKKTTGNQ ASIRNRKKSM SYEPADVKQT SDGLIVFRSK  120
YTCFEGDVSK NPYRMTVPKE LAVAVGLIKK ERVRLIDPNG KSWKVKLRLD NTKYGSGHLR  180
MTEGLIACWR ANNVSTGDTV VFELVNKKRS EMKIHFFRAE AGGKRPRLVL ELDASDPDVE  240
NSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24700.11e-11B3 family protein