PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP028925.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 229aa    MW: 24908.8 Da    PI: 7.4691
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP028925.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.54.6e-203785355
          AP2  3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 ++GVr ++ +gr++AeIrd ++    ++r++lg+f++ae+Aa+a++aa+++l+g
  PCP028925.1 37 FRGVRKRP-WGRFAAEIRDpWK----KTRVWLGTFDSAEDAARAYDAAARSLRG 85
                 8*******.**********883....5*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MRRGGRATAA AAAAAAAGVQ LCKPKTAVAA AVQEIRFRGV RKRPWGRFAA EIRDPWKKTR  60
VWLGTFDSAE DAARAYDAAA RSLRGPKAKT NFPLPAEYDN RHHHLPPPSH PSLYPDDTVC  120
DVVQASRPTS SSLSSTVESF SGPRPRPRPT SDPQPQRRPV LPVSPEDCHS DCDSSSSVVD  180
DGDDCVLMSS FRRISPLPFD LNLPPPTDDL DLFKSGDDDH DLQATALCL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.12e-27ERF family protein