PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP028964.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 246aa    MW: 27602.1 Da    PI: 4.5138
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP028964.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM37.85.6e-12281673127
          NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                  +G  F+P+ e ++ +yL +k++++ +++e+vi+++d+ k  P d ++      +   e+++ yf+++++     + +++r +++gyWk   +++  ++
  PCP028964.1  28 RGKSFNPNPETILIKYLFNKLARRATPVEDVIRHIDLQKGMPPDANQvplslfCQGDENRSAYFYICAEAVL-GDVKTTRPISDGYWKLLSNEQVHIQ 124
                  5889***********************************999988644667643334555779999998876.5789999999*****8776544333 PP

          NAM  95 k...kgel.....vglkktLvfy....kgrapkgektdWvmheyr 127
                  +   +  +     vg  +t  +y    k   + +++t   + ey 
  PCP028964.1 125 TsgdG--AatvchVGNARTWRYYgrdlKRPMRAASETCFKIREYY 167
                  33531..24566799999999995544333344556667777765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MCDTNLSFDI IAASTVTESC TEADLDERGK SFNPNPETIL IKYLFNKLAR RATPVEDVIR  60
HIDLQKGMPP DANQVPLSLF CQGDENRSAY FYICAEAVLG DVKTTRPISD GYWKLLSNEQ  120
VHIQTSGDGA ATVCHVGNAR TWRYYGRDLK RPMRAASETC FKIREYYLNP ELEPTKPIVT  180
GLYLTCFFKK LCVYEFIDED SELRLKQKGE IASSAMPEPG GDPLDTLFIG APPPSPSPWD  240
QESDDD