PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP029022.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family SBP
Protein Properties Length: 189aa    MW: 21043.2 Da    PI: 9.0835
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP029022.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP133.28.5e-4274149277
                  -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS
          SBP   2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 
                  Cq+e+C adl +ak+y+rrhkvCe+hska+vv+vsg++qrfCqqCsrfhel+efDe+krsCrrrLa+hnerrrk++
  PCP029022.1  74 CQAERCGADLVDAKRYNRRHKVCEFHSKAAVVIVSGIQQRFCQQCSRFHELTEFDEAKRSCRRRLAGHNERRRKSS 149
                  **************************************************************************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MEGKNFEGRQ TWKEKAKKDV EEVEDDYSEE EETSGGGGGL MLRFEENERQ KKAAAAGRRG  60
SGGGGGGGIA QPSCQAERCG ADLVDAKRYN RRHKVCEFHS KAAVVIVSGI QQRFCQQCSR  120
FHELTEFDEA KRSCRRRLAG HNERRRKSSG EPYGEGSSRR GVGHQYKESQ TGYQITPPGN  180
SSSKHCQIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53160.11e-46SBP family protein