PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP029129.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 305aa    MW: 33138.9 Da    PI: 4.6512
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP029129.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH50.43.9e-16153199455
                  HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                   hn  E+rRR+riN+++  L+ l+P++      K +Ka++L +A+eY+k+Lq
  PCP029129.1 153 VHNLSEKRRRNRINEKMKALQNLIPNS-----NKTDKASMLDEAIEYLKQLQ 199
                  6*************************7.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MGDTYEYDQY YKNATCCSSS SPAAQPHSAA DDMSLFLQQI LVRSSSSLAS VAAQPGKAPQ  60
FLFSPSPSVG ALLPGNLERP CHSGFFGDEI TAVDSSAALV STGNPNVSSS SFGASENEAD  120
EYDCESEEGL EAFVEAKSGG GRSSSKRSRA AEVHNLSEKR RRNRINEKMK ALQNLIPNSN  180
KTDKASMLDE AIEYLKQLQL QVQMLSMRNG MSLHSLCLPG TLQPIQLSQM RMELGEEIRP  240
LHLDMTNLFN LSNQCTTANE SYVPDMSNVV NSETSFGLEQ SIQAHLGPFQ LPASSQRSQD  300
LPALE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36930.11e-57bHLH family protein