PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP029150.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 257aa    MW: 28779.3 Da    PI: 5.4687
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP029150.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.73.3e-19122172255
          AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  +y+GVr+++ +g+++AeIrd    + k +r++lg+f taeeAa a+++a+++++g
  PCP029150.1 122 HYRGVRRRP-WGKYAAEIRDsT--R-KGARVWLGTFKTAEEAALAYDKAALRIRG 172
                  8********.**********32..2.24*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MTVHSDIHAE KPASEAIVLE NVWTSFIGVD GPKNATELSQ SWEDMPPLDG REGSMEVLQR  60
LPSLGRWISM GTEAWEELLD SVVGPAQNTE QSCNDKLEGN GATNSECEAK VERAKKVEIV  120
KHYRGVRRRP WGKYAAEIRD STRKGARVWL GTFKTAEEAA LAYDKAALRI RGSKAHLNFP  180
LETVAKAMEL DCFSLSSSSI GSNPRKRGLS DWEENVEERK PAVKRKASMH KMCDHEFDVF  240
EFQDLGSDYL DSLLSSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18450.11e-37ERF family protein