PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP029151.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 309aa    MW: 33687.1 Da    PI: 10.3778
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP029151.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.34.6e-1975125255
          AP2   2 gykGVrwdkkrgrWvAeIrdpseng..krkrfslgkfgtaeeAakaaiaarkkleg 55 
                  +y+GVr+++ +g+++AeIrd       + +r++lg+f taeeAa a+++a+ +++g
  PCP029151.1  75 HYRGVRRRP-WGKYAAEIRD----SarQGARVWLGTFNTAEEAALAYDRAAFRMRG 125
                  8********.**********....33334*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MRRQLGEEEL AKEAMALASS QQNELPLNEN DSQDMVIYQV LNEATSLTPS LLPQRHHIHR  60
QPNRLEPTKN VGKKHYRGVR RRPWGKYAAE IRDSARQGAR VWLGTFNTAE EAALAYDRAA  120
FRMRGTKAML NFPAEIVAAS SPPTSSVHRF RPSFSIPCSL NSKSSTTTSD SSGSSSMPSV  180
GTPRSESESK LSTVELSLLI PYQIFAMLRT KQPSSSSYYL CHVKSEQALS SSNLRQPHPV  240
TSTAPASCAS FKLTRQADVD SLTEIPQSVI LPNFVAAISL LGAVSGGRRV GGLGGGVKGR  300
WLGIMGWNS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47220.19e-31ERF family protein