PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP029194.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

bHLH

Protein Properties

Length: 1044aa MW: 114435 Da PI: 5.1499

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP029194.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	34.6	3.5e-11	299	341	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + K++ a+iL A++Y+k+L PCP029194.1 299 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIDYLKEL 341 79*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1044 aa Download sequence
MGGDEDDAAS WTRNSTTTHN NNNNNEAEPR RNDQDSSLGA SFSNFKSMLE GDWYMNNVLS 60 NPAQDLHAFS STQASETTLA PLQPIDSSAS CSPSPAFSLD PSQPPQQFLP PKSCFSSLLN 120 VVCSNPFDNN FDLGCDAGFL GSFQGNQPSN SSVLMGFTAL NSHSQMGTPE LSSSSEFPAS 180 RLLPVTDNAN VLDGDFGFEG FDGSAGAQLL NRAKLLYGGL LESLEKKRKR NEEGEMEEGS 240 LDVSGLNYDS DDFNEYSQVE VEENAKNGGS NSNANSTVTG VEGGDRKGKK KGLPAKNLMA 300 ERRRRKKLND RLYMLRSVVP KISKMDRASI LGDAIDYLKE LLQRINDLHN ELESAPPGSL 360 LPASTSFHPL TPTPSTLPCR VKEELCPSSL LSPKTQPKVE VRVREGQTVN IHMFCSRRPG 420 LLLSTMRALD NLDLDVQQAV ISCFNGFALD VFRAESEWRP TVLTESIRVH ANRAMGDADN 480 SGLHVWSNFS IFKPPTSLFL SAASPYEISV KFWWTQNFNG FYASAKDFSC TSRVLRVSCE 540 GGTADVLEKK RTDNQSLGEN EKQLTCVMKF GGSSVASAER MREVADLILS FPQERPVIVL 600 SAMGKTTNKL LLAGEKAVTC GVTNVSMIDE LSFIKELHLR TVEELGVDSS IISSHLKELE 660 QLLKGIAMMK ELTLRTKDYL VSFGECMSTR LFVAYLNKIG VKARQYDAFE IGFITTDDFT 720 NADILEATYP AVAKRLHGDW ICDPAIPIVT GFLGKGWRSC AVTTLGRGGS DLTATTIGKA 780 LGLREIQVWK DVDGVLTCDP NIYQRAQPVP YLTFEEAAEL AYFGAQVLHP QSMRPAREAD 840 IPVRVKNSYN PNAPGTVITH ARDMSKAVLT SIVLKRNVTM LDIVSTRMLG QYGFLAKVFT 900 TFEDLGISVD VVATSEVSIS LTLDPSKLWS RELIRQASEL DHVAEELGKI AVVNLLQHRS 960 IISLIGNVQR SSLILEKAFQ VLRTIGVNVQ MISQGASKVN ISLVVNDDEA EQCVRALHQA 1020 FFGNDLFEVE CGSENGSVLV SEQH

Sequence ? help Back to Top

Protein Sequence Length: 1044 aa Download sequence

MGGDEDDAAS WTRNSTTTHN NNNNNEAEPR RNDQDSSLGA SFSNFKSMLE GDWYMNNVLS  60
NPAQDLHAFS STQASETTLA PLQPIDSSAS CSPSPAFSLD PSQPPQQFLP PKSCFSSLLN  120
VVCSNPFDNN FDLGCDAGFL GSFQGNQPSN SSVLMGFTAL NSHSQMGTPE LSSSSEFPAS  180
RLLPVTDNAN VLDGDFGFEG FDGSAGAQLL NRAKLLYGGL LESLEKKRKR NEEGEMEEGS  240
LDVSGLNYDS DDFNEYSQVE VEENAKNGGS NSNANSTVTG VEGGDRKGKK KGLPAKNLMA  300
ERRRRKKLND RLYMLRSVVP KISKMDRASI LGDAIDYLKE LLQRINDLHN ELESAPPGSL  360
LPASTSFHPL TPTPSTLPCR VKEELCPSSL LSPKTQPKVE VRVREGQTVN IHMFCSRRPG  420
LLLSTMRALD NLDLDVQQAV ISCFNGFALD VFRAESEWRP TVLTESIRVH ANRAMGDADN  480
SGLHVWSNFS IFKPPTSLFL SAASPYEISV KFWWTQNFNG FYASAKDFSC TSRVLRVSCE  540
GGTADVLEKK RTDNQSLGEN EKQLTCVMKF GGSSVASAER MREVADLILS FPQERPVIVL  600
SAMGKTTNKL LLAGEKAVTC GVTNVSMIDE LSFIKELHLR TVEELGVDSS IISSHLKELE  660
QLLKGIAMMK ELTLRTKDYL VSFGECMSTR LFVAYLNKIG VKARQYDAFE IGFITTDDFT  720
NADILEATYP AVAKRLHGDW ICDPAIPIVT GFLGKGWRSC AVTTLGRGGS DLTATTIGKA  780
LGLREIQVWK DVDGVLTCDP NIYQRAQPVP YLTFEEAAEL AYFGAQVLHP QSMRPAREAD  840
IPVRVKNSYN PNAPGTVITH ARDMSKAVLT SIVLKRNVTM LDIVSTRMLG QYGFLAKVFT  900
TFEDLGISVD VVATSEVSIS LTLDPSKLWS RELIRQASEL DHVAEELGKI AVVNLLQHRS  960
IISLIGNVQR SSLILEKAFQ VLRTIGVNVQ MISQGASKVN ISLVVNDDEA EQCVRALHQA  1020
FFGNDLFEVE CGSENGSVLV SEQH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	289	307	KKKGLPAKNLMAERRRRKK
2	301	308	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	1e-112	bHLH family protein