PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP029271.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

WRKY

Protein Properties

Length: 169aa MW: 19106.7 Da PI: 9.785

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP029271.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	103.9	8.5e-33	90	148	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+s +prsYYrCt+++C+vkk+v+r ++d+++v +tYeg Hnh+ PCP029271.1 90 LDDGYRWRKYGQKAVKDSSYPRSYYRCTHHTCNVKKQVQRLSKDTSIVMTTYEGIHNHP 148 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 169 aa Download sequence
MTNPPDLLDI DWVSLLSGGT QAAGGFNHDQ INSFKPMAMM DNNISGSAGN TGADQEEKVG 60 VKRKGGGKMR KPVAGRPRFA FQTRSEDDIL DDGYRWRKYG QKAVKDSSYP RSYYRCTHHT 120 CNVKKQVQRL SKDTSIVMTT YEGIHNHPCE KLMETLTPLL KQMQFLSRF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46130.1	4e-57	WRKY family protein