PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP029351.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 226aa    MW: 23456.7 Da    PI: 4.922
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP029351.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.82.7e-184797155
          AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                 + ++GVr++  +g+WvAeIr+p+    + +r +lg+f t  eAa a+++a++kl+g
  PCP029351.1 47 CSFRGVRQRT-WGKWVAEIREPN----SgARLWLGTFNTSTEAALAYDEAARKLYG 97
                 579****999.**********93....35************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MEKEERKVVN TRGGGGGGGG GGGGGDSLER SRKGCMKGKG GPENALCSFR GVRQRTWGKW  60
VAEIREPNSG ARLWLGTFNT STEAALAYDE AARKLYGSSA KLNLPDHHQY PSSSSLSSAN  120
LTSSVTKPTS EYGDSVRGSS SGSGSAIGGG GEASLASLTV GGWSVGDYLW ENGSSGTNST  180
AGCVLSNWGA ICGEKDIIEM NDMGVMMELG GDEFINWDAL EPPSWN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18450.12e-42ERF family protein