PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP029501.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 198aa    MW: 22246.5 Da    PI: 8.0396
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP029501.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.93.1e-123982654
                 HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
          HLH  6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                  ++ErrRR+r+N++++ Lr+++Pk +      K++  +iL  +++Y+k+L
  PCP029501.1 39 LMAERRRRKRLNDRLSMLRSIVPKiS------KMDRTSILGDTIDYMKEL 82
                 589*********************66......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MDQQAADHHI IPSAFTMGLC GEKRSSKSKK LEGQPSKNLM AERRRRKRLN DRLSMLRSIV  60
PKISKMDRTS ILGDTIDYMK ELLERINKLQ EEGVEEGTNQ ISLMGTSKDL NPSEFDVERR  120
DKDTRIDICC ATKPGLLLST VNTIEALGLE IQQCVISCFN DFSMQASCFE GAGQRDLLSP  180
QDIKQALFRN AGYGGRCL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14249ERRRRKRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.11e-89bHLH family protein