PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP029511.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB
Protein Properties Length: 302aa    MW: 33959.6 Da    PI: 4.8242
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP029511.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.69.3e-161461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd++l+  +   G  +W+++++  g++R++k+c++rw +yl
      PCP029511.1 14 KGPWTAEEDKKLISFIITNGQCCWRAVPKLAGLRRCGKSCRLRWTNYL 61
                     79********************************************97 PP
2Myb_DNA-binding52.21.4e-1670111447
                      S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       T+ E++l +d++++lG++ W++Ia +++ gRt++++k++w+++
      PCP029511.1  70 LTEAEEQLVIDLHARLGNR-WSKIAGRLP-GRTDNEIKNHWNTH 111
                      699****************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MGRQPCCDKL GVKKGPWTAE EDKKLISFII TNGQCCWRAV PKLAGLRRCG KSCRLRWTNY  60
LRPDLKRGLL TEAEEQLVID LHARLGNRWS KIAGRLPGRT DNEIKNHWNT HIKKKLLRMG  120
IDPVTHEPLH KEEELPSSIK ETNSSSSSSH DHDDHNNNLP ADQSTNDLHN SQENDQSVVN  180
SSGSEEINSS TENSSTGAES VLLNNICNDD SLMNSLWMDE TPLIDALWND NNQVELDQGG  240
IDYNIIENNG MGFQSNWEDN CAWLLDCQDF GIHDFGMDCF NDVEVNGNKT LEVGGKLSTK  300
IN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G22680.12e-95MYB family protein