PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP029633.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 356aa    MW: 39561.4 Da    PI: 4.4775
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP029633.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.67.9e-12189232654
                  HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
          HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                   ++ErrRR+r+N++++ Lr+++Pk +      K++  +iL  +++Y+k+L
  PCP029633.1 189 LMAERRRRKRLNDRLSMLRSIVPKiS------KMDRTSILGDTIDYMKEL 232
                  589*********************66......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    
MELSEHGFLE ELLLAPRRDS WSSFNSGLNE LFPINGWSLD SFEENPVLVS SLNPQFVGFS  60
TQSSFEECPF TTTTTASSSS YPFVVDGLCA VPEINGTTTP PPFPPPDHQD YPPMVEDEEF  120
GNFLGSENHS SCLELEESKN NDNLSTCKVE MDQQAADHHI IPSAFTMGLC GEKRSSKSKK  180
LEGQPSKNLM AERRRRKRLN DRLSMLRSIV PKISKMDRTS ILGDTIDYMK ELLERINKLQ  240
EEGTEEGTNQ ISLMGTSKDL NSSEVQVRNS PKFDVEMRDG DTRIDICCAA KPGLLLSTVN  300
TIEALGLEIK QCVISCFNDF SMQASCSEGA EQINLLSPQD IKQALFRNAG YGGRCL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1192199ERRRRKRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.11e-92bHLH family protein