PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP029747.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 310aa    MW: 34876 Da    PI: 7.7462
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP029747.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.27.1e-14115166155
                  CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +r++h  +Er+RR+++N+ ++ Lr+l+P++   ++++ + a+i+  A++++k+L+
  PCP029747.1 115 QRMTHIVVERNRRKQMNEYLAVLRSLMPQS---YAQRGDQASIVGGAINFVKELE 166
                  79****************************...*******************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MTLEAVVYPQ EYPFSFGCKD FYSFNGGGSW GSDFISQDQQ GNNEYWDYCS SSPSLLQNVK  60
DWDPNSSPEA CTVNQSCQSG QHLSAMEAPP QLATTSRRKR RRTKSSKNKE EIENQRMTHI  120
VVERNRRKQM NEYLAVLRSL MPQSYAQRGD QASIVGGAIN FVKELEQLCQ SMNSNKRSKQ  180
QPLADFFTFP QFSTRATQNN NSAGVQANES NTTQCNNNQW AAADIEVTMV DNHANLKILS  240
KKRPRQLLKM VAGFQSLRLS VLHLNVTTAD EMVLYSVSVK IEEGCPLNTV DEIAAAVNQM  300
LRTIQEAAFS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
198102RKRRR
298103RKRRRT
3116127RMTHIVVERNRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.12e-88bHLH family protein