PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP029867.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 352aa    MW: 38733.7 Da    PI: 6.7132
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP029867.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.94.9e-10174220455
                  HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                   h ++Er+RR+++ + f  L  ++P +     kK++Ka++L  A+++ k+Lq
  PCP029867.1 174 DHIMAERKRREKLSQQFIALSAIVPGL-----KKMDKASVLGDAIKHAKQLQ 220
                  699************************.....9******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    
MDYSFIPQCH LNSIDEGFNA HDIGTALGEN FKESFSSESY SSYSTLATKD TTTTMTIASS  60
GGSSINETSH GTSFERPAKL LMTSSWNSSI TENVSPKPSS SSSQILSFEN LNSPLPSNPQ  120
KFCNKFEPAL KSKDEAPSQI NMQFSHAPDY EAKGCSQGTK RPCPTSRTPS HAQDHIMAER  180
KRREKLSQQF IALSAIVPGL KKMDKASVLG DAIKHAKQLQ ERVKVLEERS KKRTVESVVF  240
VKKSQLSADD DTSSCDENFD GCGPDESALP EIEARVSEKD VLIRIHCEKQ KGVVVKILSE  300
IEKLQLSVVN SSIFPFGAST LDITITSQMD DGFNMTVKDL ARKLRVALLT FM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1179184ERKRRE
2180185RKRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.12e-71bHLH family protein