PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP030204.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 165aa    MW: 18766.6 Da    PI: 8.4595
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP030204.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.31.9e-182374256
          AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                 +y+G+r ++ +g+++AeIrdps ng  +r +lg+f taeeAa+a+++a+  ++g+
  PCP030204.1 23 RYRGIRKRP-WGKFAAEIRDPSRNG--ARLWLGTFETAEEAARAYDRAAFGFRGH 74
                 7********.**********98887..**********************988886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    
MEGKRGPEKN NQQKEPKARD QNRYRGIRKR PWGKFAAEIR DPSRNGARLW LGTFETAEEA  60
ARAYDRAAFG FRGHLAILNF PNEYQYHNPS SSLSTLCSSS SSASSSSFSS VDPGRSINFG  120
RGQEEDKVIE FEYLDNNVLE ELLDTKEDHH RQGQPTHNGK KFTDI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.12e-34ERF family protein