PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP030281.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 117aa    MW: 13191.8 Da    PI: 5.137
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP030281.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM27.58.6e-091311632127
          NAM  32 evikevdi..ykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevlsk...kgelvglkktLvfykgrapkgekt 119
                  ++i+e+++  +++eP+++ +     ++ +++ +yfFs+ +k ++ g++  r + + g+W+      + ++    + + +glk+t+ + ++   +  + 
  PCP030281.1  13 TIIHECNLfgNRSEPSEIWEayegGAQRTDQALYFFSELKKLNPMGSHIDRkIGSGGTWNIGKAVATWVNGtdgNPSPIGLKRTFCYKNE--GSEDNG 108
                  56888887224689***9642444344456688******************4455789*9554444444434545556********9843..333578 PP

          NAM 120 dWvmheyr 127
                  +W+++++ 
  PCP030281.1 109 RWLLDDFL 116
                  9*999985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 117 aa     Download sequence    
MDRQPLLLPP YNTIIHECNL FGNRSEPSEI WEAYEGGAQR TDQALYFFSE LKKLNPMGSH  60
IDRKIGSGGT WNIGKAVATW VNGTDGNPSP IGLKRTFCYK NEGSEDNGRW LLDDFLL