PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP030309.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 92aa    MW: 10421 Da    PI: 5.4981
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP030309.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM514.8e-162080264
          NAM  2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskr 64
                  pGf F+Ptde lv++yLk+k+eg++ ++ +vi+e+d++k+eP dLp k      + +fF+++
  PCP030309.1 20 LPGFGFSPTDELLVSYYLKNKIEGTDSHFRHVIPEIDVCKYEPCDLPGKP--IILSHFFFTSH 80
                 59***************************999***************332..12345666655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 92 aa     Download sequence    
MSSSVAPEEG DAVRVNVSRL PGFGFSPTDE LLVSYYLKNK IEGTDSHFRH VIPEIDVCKY  60
EPCDLPGKPI ILSHFFFTSH TSCFQWILPM IM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33060.13e-15NAC family protein