PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP030651.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 361aa    MW: 40722.3 Da    PI: 4.2853
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP030651.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.68e-12195238654
                  HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
          HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                   ++ErrRR+r+N++++ Lr+++Pk +      K++  +iL  +++Y+k+L
  PCP030651.1 195 LMAERRRRKRLNDRLSMLRSIVPKiS------KMDRTSILGDTIDYMKEL 238
                  589*********************66......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    
MELNEHSFLQ ELFALRGDSS SSSTWETNIP TEMNDLLSSS GSWGNFDYFD QQNPSSSFFP  60
NSSSTHEFSP PFEPNFNNFN ATFNQEVYYP FGFGVTDEAL LSAQQQVTDS SYSTLDTPPF  120
PVQEDNPWSM LEEEELGLLG DEIHYLETQA EAAAACKVEP TQSPDQVPSF NVGICAERNT  180
RATNKKLQGQ PSKNLMAERR RRKRLNDRLS MLRSIVPKIS KMDRTSILGD TIDYMKELLE  240
RINNLQQEIE TDSDQLNVMS LFKDIKPNEM LVRNSPKFDV QRRNVDTKID ICCAGKPGLL  300
LSTVSTLEAL GLEIQQCVIS CFNDFAVQAS CSEDSDQRTL VTSEDIKQEL FRNAGYGGRC  360
L
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1198205ERRRRKRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.17e-90bHLH family protein